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  • Issues

  • Open 5
  • Closed 22
  • All 27
New issue
  • Priority Created date Last updated Milestone due date Due date Popularity Label priority Manual Weight
  • Custom screening does not work well for launching in batches
    #91 · opened Apr 03, 2017 by Shaman Narayanasamy   Important Urgent
    • CLOSED
    • 2
    updated Aug 27, 2019
  • R migrate functions
    #49 · opened Aug 25, 2015 by Shaman Narayanasamy   Enhancement Important
    • CLOSED
    • 0
    updated Feb 09, 2018
  • Prokka setup db
    #30 · opened May 29, 2015 by Yohan Jarosz   Important bug
    • CLOSED
    • 0
    updated Feb 09, 2018
  • Variant call results
    #5 · opened Mar 27, 2015 by Shaman Narayanasamy   Important
    • CLOSED
    • 4
    updated Feb 09, 2018
  • IMP on bigbug
    #32 · opened Jul 07, 2015 by Shaman Narayanasamy   Important Urgent
    • CLOSED
    • 2
    updated Feb 09, 2018
  • By default, human filetring si set on chr21
    #34 · opened Jul 16, 2015 by Yohan Jarosz   Important
    • CLOSED
    • 2
    updated Feb 09, 2018
  • At initializing, IMP download some databases and tools over the network. Sometimes it fails.
    #35 · opened Jul 16, 2015 by Yohan Jarosz   Important
    • CLOSED
    • 2
    updated Feb 09, 2018
  • different processces can access db at the same time
    #37 · opened Jul 16, 2015 by Yohan Jarosz   Important bug
    • CLOSED
    • 1
    updated Feb 09, 2018
  • INDEX_FASTA_FILE: must go in init
    #40 · opened Jul 17, 2015 by Yohan Jarosz   Important
    • CLOSED
    • 2
    updated Feb 09, 2018
  • Human sequence filtering sensitivity
    #42 · opened Jul 24, 2015 by Shaman Narayanasamy   Important Urgent
    • CLOSED
    • 1
    updated Feb 09, 2018
  • Variant calling not working
    #18 · opened Apr 02, 2015 by Shaman Narayanasamy   Important bug
    • CLOSED
    • 1
    updated Feb 09, 2018
  • Update MEGAHIT
    #56 · opened Sep 28, 2015 by Shaman Narayanasamy   Important Update Urgent
    • CLOSED
    • 2
    updated Feb 09, 2018
  • Changing ownership of files within docker
    #45 · opened Aug 18, 2015 by Shaman Narayanasamy   Enhancement Important
    • CLOSED
    • 8
    updated Feb 09, 2018
  • Work on snakemake step names
    #58 · opened Sep 29, 2015 by Shaman Narayanasamy   Enhancement Important
    • CLOSED
    • 1
    updated Feb 09, 2018
  • Util folder options
    #1 · opened Mar 25, 2015 by Shaman Narayanasamy   Important
    • CLOSED
    • 2
    updated Feb 09, 2018
  • IMP execution outside of code directory
    #60 · opened Oct 28, 2015 by Shaman Narayanasamy   Enhancement Important Potential request Update
    • CLOSED
    • 8
    updated Feb 09, 2018
  • Merge ANALYSIS_MG_GENE_COVERAGE and ANALYSIS_MT_GENE_COVERAGE:
    #3 · opened Mar 25, 2015 by Shaman Narayanasamy   Enhancement Important
    • CLOSED
    • 1
    updated Feb 09, 2018
  • Handling compressed files
    #25 · opened Apr 16, 2015 by Shaman Narayanasamy   Important
    • CLOSED
    • 5
    updated Feb 09, 2018
  • MG detuplication step not appearing in snakemake stdout.
    #48 · opened Aug 24, 2015 by Shaman Narayanasamy   Important Urgent bug
    • CLOSED
    • 7
    updated Feb 09, 2018
  • Issue with downloading ec to kegg mappings
    #4 · opened Mar 25, 2015 by Shaman Narayanasamy   Important
    • CLOSED
    • 1
    updated Feb 09, 2018
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