Issues · IMP / IMP · GitLab

Custom screening does not work well for launching in batches

#91 · opened Apr 03, 2017 by Shaman Narayanasamy Important Urgent
- CLOSED
- 2
updated Aug 27, 2019
R migrate functions

#49 · opened Aug 25, 2015 by Shaman Narayanasamy Enhancement Important
- CLOSED
- 0
updated Feb 09, 2018
Prokka setup db

#30 · opened May 29, 2015 by Yohan Jarosz Important bug
- CLOSED
- 0
updated Feb 09, 2018
Variant call results

#5 · opened Mar 27, 2015 by Shaman Narayanasamy Important
- CLOSED
- 4
updated Feb 09, 2018
IMP on bigbug

#32 · opened Jul 07, 2015 by Shaman Narayanasamy Important Urgent
- CLOSED
- 2
updated Feb 09, 2018
By default, human filetring si set on chr21

#34 · opened Jul 16, 2015 by Yohan Jarosz Important
- CLOSED
- 2
updated Feb 09, 2018
At initializing, IMP download some databases and tools over the network. Sometimes it fails.

#35 · opened Jul 16, 2015 by Yohan Jarosz Important
- CLOSED
- 2
updated Feb 09, 2018
different processces can access db at the same time

#37 · opened Jul 16, 2015 by Yohan Jarosz Important bug
- CLOSED
- 1
updated Feb 09, 2018
INDEX_FASTA_FILE: must go in init

#40 · opened Jul 17, 2015 by Yohan Jarosz Important
- CLOSED
- 2
updated Feb 09, 2018
Human sequence filtering sensitivity

#42 · opened Jul 24, 2015 by Shaman Narayanasamy Important Urgent
- CLOSED
- 1
updated Feb 09, 2018
Variant calling not working

#18 · opened Apr 02, 2015 by Shaman Narayanasamy Important bug
- CLOSED
- 1
updated Feb 09, 2018
Update MEGAHIT

#56 · opened Sep 28, 2015 by Shaman Narayanasamy Important Update Urgent
- CLOSED
- 2
updated Feb 09, 2018
Changing ownership of files within docker

#45 · opened Aug 18, 2015 by Shaman Narayanasamy Enhancement Important
- CLOSED
- 8
updated Feb 09, 2018
Work on snakemake step names

#58 · opened Sep 29, 2015 by Shaman Narayanasamy Enhancement Important
- CLOSED
- 1
updated Feb 09, 2018
Util folder options

#1 · opened Mar 25, 2015 by Shaman Narayanasamy Important
- CLOSED
- 2
updated Feb 09, 2018
IMP execution outside of code directory

#60 · opened Oct 28, 2015 by Shaman Narayanasamy Enhancement Important Potential request Update
- CLOSED
- 8
updated Feb 09, 2018
Merge ANALYSIS_MG_GENE_COVERAGE and ANALYSIS_MT_GENE_COVERAGE:

#3 · opened Mar 25, 2015 by Shaman Narayanasamy Enhancement Important
- CLOSED
- 1
updated Feb 09, 2018
Handling compressed files

#25 · opened Apr 16, 2015 by Shaman Narayanasamy Important
- CLOSED
- 5
updated Feb 09, 2018
MG detuplication step not appearing in snakemake stdout.

#48 · opened Aug 24, 2015 by Shaman Narayanasamy Important Urgent bug
- CLOSED
- 7
updated Feb 09, 2018
Issue with downloading ec to kegg mappings

#4 · opened Mar 25, 2015 by Shaman Narayanasamy Important
- CLOSED
- 1
updated Feb 09, 2018