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IMP
IMP
Issues
Open
5
Closed
22
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27
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IMP-specific prokka conda recipe needed
#141
· opened
Oct 02, 2018
by
Cedric Laczny
Important
conda
1
updated
Oct 04, 2018
Why are Fasta index and BAM index not created by distinct rules, but in the variant_calling rule?
#140
· opened
Oct 01, 2018
by
Cedric Laczny
Important
bug
1
updated
Oct 01, 2018
samtools-1.9 might break host filtering step
#137
· opened
Sep 21, 2018
by
Cedric Laczny
Important
Update
4
updated
Oct 08, 2018
megahit iterations: 99-25=74 modulo 4 is 2 and not 0
#105
· opened
Jul 06, 2017
by
Patrick May
Enhancement
Important
Update
1
updated
Oct 04, 2017
Custom screening does not work well for launching in batches
#91
· opened
Apr 03, 2017
by
Shaman Narayanasamy
Important
Urgent
CLOSED
2
updated
Aug 27, 2019
Metaquast not working
#79
· opened
Nov 11, 2016
by
Shaman Narayanasamy
Important
bug
0
updated
Nov 10, 2017
Tracking outreach
#64
· opened
Feb 15, 2016
by
Cedric Laczny
Important
CLOSED
1
1
updated
Feb 09, 2018
R script reading of GFF files
#63
· opened
Dec 09, 2015
by
Shaman Narayanasamy
Important
bug
CLOSED
1
updated
Feb 09, 2018
IMP execution outside of code directory
#60
· opened
Oct 28, 2015
by
Shaman Narayanasamy
Enhancement
Important
Potential request
Update
CLOSED
8
updated
Feb 09, 2018
Work on snakemake step names
#58
· opened
Sep 29, 2015
by
Shaman Narayanasamy
Enhancement
Important
CLOSED
1
updated
Feb 09, 2018
Update MEGAHIT
#56
· opened
Sep 28, 2015
by
Shaman Narayanasamy
Important
Update
Urgent
CLOSED
2
updated
Feb 09, 2018
R migrate functions
#49
· opened
Aug 25, 2015
by
Shaman Narayanasamy
Enhancement
Important
CLOSED
0
updated
Feb 09, 2018
MG detuplication step not appearing in snakemake stdout.
#48
· opened
Aug 24, 2015
by
Shaman Narayanasamy
Important
Urgent
bug
CLOSED
7
updated
Feb 09, 2018
Changing ownership of files within docker
#45
· opened
Aug 18, 2015
by
Shaman Narayanasamy
Enhancement
Important
CLOSED
8
updated
Feb 09, 2018
Human sequence filtering sensitivity
#42
· opened
Jul 24, 2015
by
Shaman Narayanasamy
Important
Urgent
CLOSED
1
updated
Feb 09, 2018
INDEX_FASTA_FILE: must go in init
#40
· opened
Jul 17, 2015
by
Yohan Jarosz
Important
CLOSED
2
updated
Feb 09, 2018
different processces can access db at the same time
#37
· opened
Jul 16, 2015
by
Yohan Jarosz
Important
bug
CLOSED
1
updated
Feb 09, 2018
At initializing, IMP download some databases and tools over the network. Sometimes it fails.
#35
· opened
Jul 16, 2015
by
Yohan Jarosz
Important
CLOSED
2
updated
Feb 09, 2018
By default, human filetring si set on chr21
#34
· opened
Jul 16, 2015
by
Yohan Jarosz
Important
CLOSED
2
updated
Feb 09, 2018
IMP on bigbug
#32
· opened
Jul 07, 2015
by
Shaman Narayanasamy
Important
Urgent
CLOSED
2
updated
Feb 09, 2018
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