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  • #78

Closed
Open
Created Oct 31, 2016 by Anna Buschart@anna.buschartMaintainer

(How) can I turn binning of?

Hi guys - I have run IMP on a few data sets which don't result in contigs with a bacterial marker gene for Maxbin. Maxbin then throws an error message: "Marker gene search reveals that the dataset cannot be binned (the medium of marker gene number <= 1)" and I can live with that (I didn't expect bacteria). But IMP also dies and does not finish all the other nice things it does. Can I run IMP without Maxbin, and if yes what's the magic word? For the longer term, I guess it would be good if IMP could ignore this kind of error and report that binning wasn't possible but finish? Thanks - Anna

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