Add "list" option to IMP python script
@yjarosz, could you please add an option to the IMP python script such that it would list all/remaining steps?
IMP -l or
IMP -list for all steps within the pipeline such that users will be able to invoke them from outside the container.
Or if we had an analysis that failed/stopped halfway, we can do something like
IMP -m MG.R1 -m MG.R2 -t MT.R1 -t MT.R2 -o output_dir --list-incomplete, to list the remaining steps.
Not sure if the above is the best way to do it, but it would be cool and quite convenient instead of entering the container each time. Tell me what you think. This is not urgent, please leave it for last :)