Util folder options
Is it possible for the util folder to be centralized. With that, all the databases and large files will not require download each and every analysis run. This is important especially if one performs analysis of linked samples (time series, cohort, etc.) and would prefer to have a consistent database for all those samples.
Perhaps, the default may be to do it in each and every single folder, while the user can set it using "UTILDIR" or some such option...
Or
Create have the utility database (Util_DB) and util folder (Util) to be separate. The logs, versions etc may be stored within the util folder as one would like to inspect each and every analysis step.
@yjarosz, Let me know what you think.