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Commit bf5ec451 authored by Yohan Jarosz's avatar Yohan Jarosz
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copy screen directly into db folder

parent 80dba9fe
Pipeline #1541 canceled with stages
            in 39 seconds
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            impy.py
            View file @ bf5ec451
            ...@@ -386,7 +386,7 @@ def init(ctx, generate, screen): ...@@ -386,7 +386,7 @@ def init(ctx, generate, screen):
            click.secho('Path provided does not exist: `%s`.' % screen_path, fg='red', bold=True) click.secho('Path provided does not exist: `%s`.' % screen_path, fg='red', bold=True)
            ctx.abort() ctx.abort()
            screen_path_name = screen_path.name.splitext()[0] screen_path_name = screen_path.name.splitext()[0]
            database_path = Path(ctx.obj['database-path']).abspath() database_path = Path(ctx.obj['database-path']).abspath() / 'filtering'
            shutil.copy(screen_path, database_path / screen_path_name + '.fa') shutil.copy(screen_path, database_path / screen_path_name + '.fa')
            ev['FILTER'] = screen_path_name ev['FILTER'] = screen_path_name
            # if not generate: # if not generate:
            ......
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