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Commit a80d78ab authored by Yohan Jarosz's avatar Yohan Jarosz
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fix gilab ci

parent c89cd34f
Pipeline #1709 failed with stages
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                .gitlab-ci.yml
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                ...@@ -57,7 +57,6 @@ dag-mgmt-nf: ...@@ -57,7 +57,6 @@ dag-mgmt-nf:
                dag-mgmt-nf2: dag-mgmt-nf2:
                stage: dag stage: dag
                script: script:
                - pip3.4 install --editable . --user
                - impy -s . -c $CI_PROJECT_DIR/test/default.conf.json -d /mnt/data/db run -m $CI_PROJECT_DIR/test/MG.R1.small.fq -m $CI_PROJECT_DIR/test/MG.R2.small.fq -t $CI_PROJECT_DIR/test/MT.R1.small.fq -t $CI_PROJECT_DIR/test/MT.R2.small.fq -o $CI_PROJECT_DIR/$CI_BUILD_ID -x "snakemake -n" --no-filtering - impy -s . -c $CI_PROJECT_DIR/test/default.conf.json -d /mnt/data/db run -m $CI_PROJECT_DIR/test/MG.R1.small.fq -m $CI_PROJECT_DIR/test/MG.R2.small.fq -t $CI_PROJECT_DIR/test/MT.R1.small.fq -t $CI_PROJECT_DIR/test/MT.R2.small.fq -o $CI_PROJECT_DIR/$CI_BUILD_ID -x "snakemake -n" --no-filtering
                dag-mg-default: dag-mg-default:
                ......
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