config.multiqc.yaml 1.12 KB
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############################################################
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# MultiQC Config
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############################################################
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# Based on config_defaults.yaml from MultiQC (v1.8)

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##############################
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# Info
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##############################

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title: "IMP3 processing summary"
subtitle: "MultiQC report"
intro_text: "Please not that only the output of tools supported by MultiQC has been included in this report."
# report_comment: "For more information please see the sources listed below:"
report_header_info:
    - IMP3 Docs: "https://imp3.readthedocs.io/en/impiris" # TODO
    - MultiQC Docs: "https://multiqc.info/docs"
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    # TODO: would be nice to have here some sample info
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# Logo
custom_logo: null # TODO
custom_logo_url: null # TODO
custom_logo_title: null # TODO

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##############################
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# Output
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##############################

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data_format: 'tsv'
force: true
make_data_dir: true
zip_data_dir: true
data_dump_file: true
export_plots: false
plots_force_flat: false
plots_force_interactive: true
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##############################
# Tools
##############################

# FastQC

# Prokka
prokka_fn_snames: true