Commit b67f4b32 authored by Sascha Herzinger's avatar Sascha Herzinger

fixing ci

parent a7439a72
Pipeline #5420 failed with stages
in 24 seconds
......@@ -7,13 +7,11 @@ RUN mkdir /app/ \
&& printf "[lcsb-base]\nname=LCSB Base Repo\nbaseurl=http://lcsb-cent-mirr-server.uni.lu/CentOS/7/os/x86_64/\nenabled=1" > /etc/yum.repos.d/lcsb-base.repo \
&& rm -rf /var/cache/yum \
&& yum clean all \
&& yum install --nogpg -y python34 python34-pip python34-devel readline-devel R wget \
&& wget https://bioconductor.org/packages/release/bioc/src/contrib/limma_3.36.1.tar.gz \
&& wget https://bioconductor.org/packages/release/bioc/src/contrib/DESeq2_1.20.0.tar.gz \
&& R CMD INSTALL limma_*.tar.gz DESeq2_*.tar.gz \
&& rm limma_*.tar.gz DESeq2_*.tar.gz
&& yum install --nogpg -y python34 python34-pip python34-devel readline-devel libcurl-devel libxml2-devel R wget \
&& R -e 'source("https://bioconductor.org/biocLite.R"); biocLite(); biocLite("limma", "DESeq2")'
COPY tests/ /app/tests/
WORKDIR /app/
ARG SDIST
COPY $SDIST /app/
RUN pip3 install -i https://pypi.lcsb.uni.lu/simple fractalis-*.tar.gz gunicorn
\ No newline at end of file
RUN pip3 install -i https://pypi.lcsb.uni.lu/simple fr
actalis-*.tar.gz gunicorn
\ No newline at end of file
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