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ONT_pilot_gitlab
Merge requests
Open
0
Merged
73
Closed
4
All
77
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Created date
Priority
Created date
Last updated
Milestone due date
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added mappers to Snakefile
!1
· created
Mar 17, 2020
by
Susheel Busi
Clean-up
MERGED
0
updated
Mar 17, 2020
included 'mappers' in other redundant lines
!2
· created
Mar 17, 2020
by
Susheel Busi
Clean-up
MERGED
1
0
updated
Mar 17, 2020
this is the original file created by CCL for ONT snakemake analyses
!3
· created
Mar 17, 2020
by
Susheel Busi
Greatness achieved
MERGED
0
updated
Mar 17, 2020
minor changes to line 61
!4
· created
Mar 17, 2020
by
Susheel Busi
MERGED
0
updated
Mar 17, 2020
updated Snakefile
!5
· created
Mar 17, 2020
by
Susheel Busi
MERGED
0
updated
Mar 17, 2020
updated files with NO_MOD .cfg basecalling for comparison
!6
· created
Mar 17, 2020
by
Susheel Busi
Clean-up
MERGED
0
updated
Mar 17, 2020
'rule all' updated
!7
· created
Mar 18, 2020
by
Susheel Busi
Greatness achieved
MERGED
0
updated
Mar 18, 2020
added rules for running NanoStat on basecalled files without any methylation modifications
!8
· created
Mar 18, 2020
by
Susheel Busi
MERGED
0
updated
Mar 18, 2020
added rules for running basecall_qc_merge_NO_MOD.done
!9
· created
Mar 18, 2020
by
Susheel Busi
MERGED
0
updated
Mar 18, 2020
Work
!10
· created
Mar 18, 2020
by
Susheel Busi
MERGED
0
updated
Mar 18, 2020
Work
!11
· created
Mar 18, 2020
by
Susheel Busi
MERGED
0
updated
Mar 18, 2020
WIP: Work
!12
· created
Mar 18, 2020
by
Susheel Busi
CLOSED
0
updated
Mar 18, 2020
included nanopolish indexing
!13
· created
Mar 19, 2020
by
Susheel Busi
MERGED
0
updated
Mar 19, 2020
added rules for running MMSEQ2 comparisons
!14
· created
Mar 25, 2020
by
Susheel Busi
Greatness achieved
MERGED
0
updated
Mar 25, 2020
changes to mmseq2 rules
!15
· created
Mar 25, 2020
by
Susheel Busi
Greatness achieved
MERGED
0
updated
Mar 25, 2020
Work
!16
· created
Mar 25, 2020
by
Susheel Busi
MERGED
0
updated
Mar 25, 2020
updates to mmseq2 section made
!17
· created
Apr 15, 2020
by
Susheel Busi
MERGED
0
updated
Apr 15, 2020
updated 'interactive' and 'batch' cpus to bigmem due to occupied CPUs in the other two
!18
· created
Apr 16, 2020
by
Susheel Busi
MERGED
0
updated
Apr 16, 2020
updated Snakefile
!19
· created
Apr 18, 2020
by
Susheel Busi
MERGED
0
updated
Apr 18, 2020
Major changes including plotting files
!20
· created
Apr 19, 2020
by
Susheel Busi
MERGED
0
updated
Apr 19, 2020
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