Issues · ESB / ONT_pilot_gitlab · GitLab

Plasflow: hybrid vs. SR assembly

#33 · created Jun 04, 2020 by Valentina Galata Stretch goal Analysis Figure Somewhere over the rainbow
- 0
updated Jul 03, 2020
Publicly available datasets

#39 · created Jun 11, 2020 by Cedric Laczny Stretch goal Analysis
- CLOSED
- 2
- 9
updated Nov 12, 2020
Tool installation: casc

#41 · created Jun 26, 2020 by Valentina Galata Stretch goal Tool
- CLOSED
- 1
updated Jun 26, 2020
Tool installation: minced

#42 · created Jun 26, 2020 by Valentina Galata Stretch goal Tool
- CLOSED
- 1
updated Jun 26, 2020
Tool installation: operams

#43 · created Jun 26, 2020 by Valentina Galata Stretch goal Tool
- CLOSED
- 2
updated Oct 13, 2020
Polishing w/ racon: unpolished sequences

#51 · created Jul 03, 2020 by Valentina Galata Stretch goal Analysis Discussion Investigation Somewhere over the rainbow Tool
- CLOSED
- 1
updated Jul 07, 2020
Assembly w/ metaT 0 of 3 tasks completed

#52 · created Jul 03, 2020 by Valentina Galata Stretch goal Analysis Somewhere over the rainbow
- 0
updated Nov 03, 2020
workflow: do not expect to have FAST5 files

#56 · created Jul 09, 2020 by Valentina Galata Stretch goal Enhancement Somewhere over the rainbow
- CLOSED
- 0
updated Jul 13, 2020
Alternative tools for gene calling

#85 · created Sep 18, 2020 by Valentina Galata Stretch goal Analysis Somewhere over the rainbow Tool
- 1
updated Sep 18, 2020
Analysis: Comparing assemblies: SibeliaZ

#94 · created Sep 29, 2020 by Valentina Galata Stretch goal Analysis Tool
- 3
updated Nov 10, 2020
Analysis: metaP

#97 · created Sep 29, 2020 by Valentina Galata Stretch goal Analysis Clean Up Enhancement
- CLOSED
- 6
updated Mar 25, 2021
Annotation/Analysis: FAMLI

#99 · created Oct 19, 2020 by Valentina Galata Stretch goal Analysis Enhancement Somewhere over the rainbow Tool
- 0
updated Oct 19, 2020
Binning - methylation vs non-methylation

#117 · created Jan 14, 2021 by Susheel Busi Stretch goal Somewhere over the rainbow
- 0
updated Jan 14, 2021
Manuscript: discovery of novel taxa in GDB

#122 · created Feb 26, 2021 by Valentina Galata Stretch goal Analysis Data Discussion Manuscript Somewhere over the rainbow
- 2
updated Mar 25, 2021
Analysis: metaT cov w.r.t. gene length

#126 · created Mar 25, 2021 by Valentina Galata Stretch goal Analysis Enhancement Somewhere over the rainbow
- 0
updated Mar 25, 2021