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ONT_pilot_gitlab
Issues
Open
6
Closed
20
All
26
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Updated date
Priority
Created date
Updated date
Milestone due date
Due date
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Label priority
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Title
Weight
Blocking
Assembly: canu's genomeSize parameter test
#110
· created
Nov 20, 2020
by
Valentina Galata
The bright future
Investigation
Tool
CLOSED
1
3
updated
Dec 08, 2020
Analysis: contig coverage segmentation
#107
· created
Nov 16, 2020
by
Valentina Galata
The bright future
Enhancement
Tool
CLOSED
2
updated
Nov 26, 2020
Assembly: OPERA-MS: change CMD (output, options, tmp files)
#104
· created
Nov 13, 2020
by
Valentina Galata
The bright future
Enhancement
Tool
CLOSED
0
updated
Nov 13, 2020
Assemly: MetaSPAdes hybrid: scaffolds vs contigs
#105
· created
Nov 13, 2020
by
Valentina Galata
The bright future
Enhancement
Tool
CLOSED
0
updated
Nov 13, 2020
Annotation: RGI: invalid character error
#106
· created
Nov 13, 2020
by
Valentina Galata
The bright future
Bug
Tool
CLOSED
0
updated
Nov 13, 2020
Error: operams assembly using spades contigs
#98
· created
Oct 09, 2020
by
Valentina Galata
The bright future
Bug
Tool
CLOSED
6
updated
Nov 13, 2020
Analysis: Comparing assemblies: MashMap
#95
· created
Sep 29, 2020
by
Valentina Galata
The bright future
Analysis
Tool
CLOSED
0
updated
Nov 03, 2020
Analysis: Comparing assemblies: mummer/dnadiff
#93
· created
Sep 29, 2020
by
Valentina Galata
The bright future
Analysis
Tool
CLOSED
0
updated
Nov 03, 2020
Analysis: Do not update DIAMOND
#101
· created
Oct 28, 2020
by
Valentina Galata
The bright future
Bug
Tool
CLOSED
0
updated
Oct 28, 2020
Analysis: Comparing assemblies: FastANI
#80
· created
Aug 18, 2020
by
Valentina Galata
The bright future
Analysis
Tool
CLOSED
0
updated
Oct 20, 2020
Annotation: KEGG
#92
· created
Sep 29, 2020
by
Valentina Galata
The bright future
Tool
CLOSED
2
updated
Oct 20, 2020
Tool installation: operams
#43
· created
Jun 26, 2020
by
Valentina Galata
Stretch goal
Tool
CLOSED
2
updated
Oct 13, 2020
Assembly: Update Flye
#90
· created
Sep 29, 2020
by
Valentina Galata
The bright future
Tool
CLOSED
0
updated
Oct 08, 2020
Assembly: MaSuRCA
#91
· created
Sep 29, 2020
by
Valentina Galata
The bright future
Tool
CLOSED
1
updated
Oct 07, 2020
tax. classification of proteins w/ kaiju
#67
· created
Jul 24, 2020
by
Valentina Galata
Analyses
Analysis
Tool
CLOSED
3
updated
Jul 29, 2020
Aligning meta-genomes using mummer
#44
· created
Jun 26, 2020
by
Valentina Galata
Analyses
Analysis
Tool
CLOSED
1
1
updated
Jul 14, 2020
Polishing w/ racon: unpolished sequences
#51
· created
Jul 03, 2020
by
Valentina Galata
Stretch goal
Analysis
Discussion
Investigation
Somewhere over the rainbow
Tool
CLOSED
1
updated
Jul 07, 2020
QUAST: TSV instead of TXT as output
#46
· created
Jun 30, 2020
by
Valentina Galata
Clean-up
Clean Up
Tool
CLOSED
0
updated
Jul 01, 2020
Tool installation: minced
#42
· created
Jun 26, 2020
by
Valentina Galata
Stretch goal
Tool
CLOSED
1
updated
Jun 26, 2020
Tool installation: casc
#41
· created
Jun 26, 2020
by
Valentina Galata
Stretch goal
Tool
CLOSED
1
updated
Jun 26, 2020
