Commit 2362a407 authored by Valentina Galata's avatar Valentina Galata
Browse files

updated sbatch.sh for GDB

parent c6afa55b
......@@ -22,9 +22,9 @@ ONTP_CORES=60
# snakemake file
ONTP_SMK="workflow/Snakefile"
# config file
ONTP_CONFIG="config/config.yaml" # USER INPUT REQUIRED
ONTP_CONFIG="config/GDB/config.yaml" # USER INPUT REQUIRED
# slurm config file
ONTP_SLURM="config/slurm.yaml"
ONTP_SLURM="config/GDB/slurm.yaml"
# slurm cluster call
ONTP_CLUSTER="-p {cluster.partition} -q {cluster.qos} {cluster.explicit} -N {cluster.nodes} -n {cluster.n} -c {threads} -t {cluster.time} --job-name={cluster.job-name}"
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment